CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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BGIBMGA005733
(
Bombyx mori
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
BGIBMGA005733
T54986_0.6
SilkDB (2008-Apr-11)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIBMGA005733
RRM
128
187
RQEYFGKYGKIHKVVINQSTTYAGSQGPSASAYVTYVSSADALRAIQGVNNVTLDGRVLK
Links
Other
RRM
family RBPs
Other
Bombyx mori
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CNOT4
Echinops telfairi
ENSETEG00000013407
I
0.800
CNOT4
Ochotona princeps
ENSOPRG00000001023
I
0.800
GL19177
Drosophila persimilis
FBgn0156776
I
0.716