CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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3703.m00181
(
Tetrahymena thermophila
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
3703.m00181
T55237_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
3703.m00181
RRM
775
845
IFIGGLNYDLNEGDISTVFSQWGQIVDLRLVRDKKTGRSKGYCFLAYEDQRSTILAVENFNQINLCGRIIG
Links
Other
RRM
family RBPs
Other
Tetrahymena thermophila
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Aqu1.228439
Amphimedon queenslandica
Aqu1.228439
N
0.732
Aqu1.200557
Amphimedon queenslandica
Aqu1.200557
N
0.718
XP_002164481.1
Hydra magnipapillata
XP_002164481.1
N
0.718
GSPATP00026936001
Paramecium tetraurelia
GSPATP00026936001
N
0.704