8520_YGL044C (Saccharomyces paradoxus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 8520_YGL044C T55310_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Rna15
M300_0.6 		Saccharomyces cerevisiae UGYGUAUUYUCC SELEX
Cook et al.(2011)
377_9199325 		1.000
Rna15
M299_0.6 		Saccharomyces cerevisiae UGYGUAUUYUCC SELEX
Cook et al.(2011)
376_9199325 		1.000
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
8520_YGL044C RRM 20 90

Links

Other RRM family RBPs
Other Saccharomyces paradoxus RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Rna15 Saccharomyces cerevisiae YGL044C D 1.000
7766_YGL044C Saccharomyces mikatae 7766_YGL044C I 1.000
8821_YGL044C Saccharomyces bayanus 8821_YGL044C I 0.986
Scas_Contig621.16 Saccharomyces castellii Scas_Contig621.16 I 0.930
ZYRO0G07216g Zygosaccharomyces rouxii ZYRO0G07216g I 0.901
SAKL0H23298g Lachancea kluyveri SAKL0H23298g I 0.887
Kwal_7522 Kluyveromyces waltii Kwal_7522 I 0.887
KLTH0D04158g Kluyveromyces thermotolerans KLTH0D04158g I 0.887
CAGL0D06182g Candida glabrata CAGL0D06182g I 0.873
A7TNI6_VANPO Vanderwaltozyma polyspora A7TNI6_VANPO I 0.845
AGR010C Ashbya gossypii AGR010C I 0.845