CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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A7TF54_VANPO
(
Vanderwaltozyma polyspora
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
A7TF54_VANPO
T55335_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
A7TF54
RRM
249
319
LFICKLNPSTKAKDIAMIFQRFGEIKSVEIIKDKESGYSLGYGFIEFTTKHSCELAYTKMESTIIDDRRIH
Links
Other
RRM
family RBPs
Other
Vanderwaltozyma polyspora
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZYRO0F16214g
Zygosaccharomyces rouxii
ZYRO0F16214g
N
0.746
Kwal_13496
Kluyveromyces waltii
Kwal_13496
N
0.718