CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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A7TJ31_VANPO
(
Vanderwaltozyma polyspora
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
A7TJ31_VANPO
T55344_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
A7TJ31
RRM
336
399
LFIGNLPLKNVSKEDLFRIFSPFGHILQINIKNAFGFIQYDNSQSVLAAIDSESNEINFGKKLI
Links
Other
RRM
family RBPs
Other
Vanderwaltozyma polyspora
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CAGL0H03267g
Candida glabrata
CAGL0H03267g
N
0.875
Kwal_23945
Kluyveromyces waltii
Kwal_23945
N
0.859
KLTH0H04664g
Kluyveromyces thermotolerans
KLTH0H04664g
N
0.859
AFL070C
Ashbya gossypii
AFL070C
N
0.828
SAKL0A05016g
Lachancea kluyveri
SAKL0A05016g
N
0.812