CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SAKL0H02332g
(
Lachancea kluyveri
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
SAKL0H02332g
T58585_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
SAKL0H02332g
RRM
199
269
LYIRGIPKDLTVDDLVPVFSKFGPVLSLKIICHPSTGQSLGYGFISFPLGSQAALCIKELNGNLMNSSPLF
SAKL0H02332g
RRM
364
410
DNVETCESQYEESPLRGYGFIKFSTHDQALKAIEKCRELEWSGNKLI
SAKL0H02332g
RRM
576
616
LYIKHLPFSWKDRDLYQFYEKFGEIISAKIITVGGSKNEDN
SAKL0H02332g
RRM
625
669
SKKQDELPLGTSKGYGFVCFKNPLDASRAMMATDRFQIDENHTLY
Links
Other
RRM
family RBPs
Other
Lachancea kluyveri
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
KLTH0H00792g
Kluyveromyces thermotolerans
KLTH0H00792g
N
0.738
Kwal_24709
Kluyveromyces waltii
Kwal_24709
N
0.738