CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
XP_001181870.1
(
Strongylocentrotus purpuratus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
XP_001181870.1
T58878_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_001181870.1
RRM
116
186
LGVFGLSLYTTERDLRDVYEHYGTLTNVNVVYDHQTGRSRGFAFVMFANTGDATAARESTNGTEVDGRRIR
Links
Other
RRM
family RBPs
Other
Strongylocentrotus purpuratus
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
XP_796831.1
Strongylocentrotus purpuratus
XP_796831.1
N
1.000
TRA2A
Taeniopygia guttata
ENSTGUG00000002795
N
0.704
TRA2A
Meleagris gallopavo
ENSMGAG00000010514
N
0.704
Q5ZLY6_CHICK
Gallus gallus
ENSGALG00000010973
N
0.704
tra2a
Danio rerio
ENSDARG00000007863
N
0.704