CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AAI29627
(
Xenopus laevis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AAI29627
T59629_0.6
Xenbase (2010-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAI29627
RRM
231
289
GVGMSQTMLHEAFSSFGNIIDLSLDAPRNCAFVTYEKMESADQAIAGLNNKSIEDIPVK
Links
Other
RRM
family RBPs
Other
Xenopus laevis
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAI08547
Xenopus laevis
AAI08547
N
0.898
rdbp
Xenopus tropicalis
ENSXETG00000010931
N
0.898
RDBP
Anolis carolinensis
ENSACAG00000011678
N
0.729