CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
CJA11433
(
Caenorhabditis japonica
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
CJA11433
T60226_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA11433
S1
54
113
GIPVGIRVRFDNGMVGFCPNKNISSQHVDNPLKRVKIGSPYYFKVMKVDKERFSFLLSCK
Links
Other
S1
family RBPs
Other
Caenorhabditis japonica
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CRE20235
Caenorhabditis remanei
CRE20235
N
0.774