CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TGME49_070160
(
Toxoplasma gondii
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
TGME49_070160
T60906_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TGME49_070160
S1
109
140
LRPHWDIRVGDLVPVKVASVDLVCHRLVLQLD
TGME49_070160
S1
153
204
GPNTWLKGTVAQILPFGAVVNLAPGIDGLLHISRFPPRFENSPGRQVKPRGS
Links
Other
S1
family RBPs
Other
Toxoplasma gondii
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TGGT1_108690
Toxoplasma gondii
TGGT1_108690
N
1.000
TGVEG_017470
Toxoplasma gondii
TGVEG_017470
N
1.000