CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GSTUMT00003070001
(
Tuber melanosporum
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
GSTUMT00003070001
T61564_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSTUMT00003070001
S1
203
273
YKIYNGRVSGMKDFGVFVSLQNVKGKVDGLVHISAIRLDRVNHPADLLSRGQSVKVKVVSVQGTRIGLSMK
Links
Other
S1
family RBPs
Other
Tuber melanosporum
RBPs
8 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PMAA_073440
Penicillium marneffei
PMAA_073440
N
0.736
An14g03770
Aspergillus niger
CADANGAG00011313
N
0.736
ANIA_04721
Aspergillus nidulans
CADANIAG00005708
N
0.722
PABG_04784
Paracoccidioides brasiliensis
PABG_04784
N
0.708
ATEG_07640
Aspergillus terreus
CADATEAG00000474
N
0.707
AFUA_5G10830
Aspergillus fumigatus
CADAFUAG00006235
N
0.707
AFLA_119410
Aspergillus flavus
CADAFLAG00012513
N
0.703
AO090010000458
Aspergillus oryzae
CADAORAG00004519
N
0.703