CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MDP0000273085
(
Malus x domestica
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
MDP0000273085
T61611_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000273085
S1
223
286
MMIQVKNITDIGTYVSLLEYNNIEGMILFSELSHRRIRSVSSLIKVGHIEPVMVLRADKDGEDD
Links
Other
S1
family RBPs
Other
Malus x domestica
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MDP0000310288
Malus x domestica
MDP0000310288
N
0.797
MDP0000197339
Malus x domestica
MDP0000197339
N
0.779
MDP0000215901
Malus x domestica
MDP0000215901
N
0.708