CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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YTHDF1
(
Echinops telfairi
)
YTH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF04146 (YTH)
IPR007275
ENSETEG00000017860
T62019_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000014512
YTH
290
378
LLFSVKGSGQFCKPEMQSTMDEGTSAGVWSQDKCNGKFDVKWILVKAVPNSQLRHIRLKSQDQKPVTSSGDTQQVPLEKARQVLKILVP
Links
Other
YTH
family RBPs
Other
Echinops telfairi
RBPs
27 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
YTHDF1
Bos taurus
ENSBTAG00000010383
N
0.725
Ythdf1
Dipodomys ordii
ENSDORG00000002879
N
0.725
YTHDF1
Pteropus vampyrus
ENSPVAG00000017568
N
0.714
Ythdf1
Rattus norvegicus
ENSRNOG00000027015
N
0.714
LOC100060217
Equus caballus
ENSECAG00000019475
N
0.714
YTHDF1
Taeniopygia guttata
ENSTGUG00000007565
N
0.714
Ame_R014316
Ailuropoda melanoleuca
Ame_R014316
N
0.714
A6MKQ0_CALJA
Callithrix jacchus
ENSCJAG00000010056
N
0.714
YTHDF1
Canis familiaris
ENSCAFG00000012772
N
0.714
ENSACAG00000005560
Anolis carolinensis
ENSACAG00000005560
N
0.714
ENSPPYG00000011226
Pongo pygmaeus
ENSPPYG00000011226
N
0.714
YTHDF1
Tursiops truncatus
ENSTTRG00000001804
N
0.714
YTHDF1
Procavia capensis
ENSPCAG00000002452
N
0.714
ENSMGAG00000006139
Meleagris gallopavo
ENSMGAG00000006139
N
0.714
YTHDF1
Loxodonta africana
ENSLAFG00000008884
N
0.714
YTHDF1
Erinaceus europaeus
ENSEEUG00000007461
N
0.714
Q5ZME7_CHICK
Gallus gallus
ENSGALG00000005745
N
0.714
YTHDF1
Myotis lucifugus
ENSMLUG00000002241
N
0.714
YTHDF1
Macaca mulatta
ENSMMUG00000009227
N
0.714
ENSOANG00000003723
Ornithorhynchus anatinus
ENSOANG00000003723
N
0.714
Ythdf1
Mus musculus
ENSMUSG00000038848
N
0.714
ENSMODG00000016842
Monodelphis domestica
ENSMODG00000016842
N
0.714
YTHDF1
Otolemur garnettii
ENSOGAG00000000480
N
0.714
YTHDF1
Pan troglodytes
ENSPTRG00000013730
N
0.703
YTHDF1
Gorilla gorilla
ENSGGOG00000008340
N
0.703
YTHDF1
Homo sapiens
ENSG00000149658
N
0.703
YTHDF1
Cavia porcellus
ENSCPOG00000010202
N
0.703