GSVIVG00033508001 (Vitis vinifera)
CCCH ZF,KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00013 (KH_1) 		IPR000571
IPR018111 		GSVIVG00033508001 T00169_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00033508001 CCCH ZF 35 59
GSVIVT00033508001 KH 113 175
GSVIVT00033508001 CCCH ZF 206 231

Links

Other CCCH ZF,KH family RBPs
Other Vitis vinifera RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Genemark.10526_g Serpula lacrymans Genemark.10526_g N 0.000
Genemark.11049_g Serpula lacrymans Genemark.11049_g N 0.000
Genemark.11600_g Serpula lacrymans Genemark.11600_g N 0.000
Genemark.11813_g Serpula lacrymans Genemark.11813_g N 0.000
Genemark.12016_g Serpula lacrymans Genemark.12016_g N 0.000
Genemark.12122_g Serpula lacrymans Genemark.12122_g N 0.000
Genemark.12199_g Serpula lacrymans Genemark.12199_g N 0.000
Genemark.1877_g Serpula lacrymans Genemark.1877_g N 0.000
Genemark.2320_g Serpula lacrymans Genemark.2320_g N 0.000
Genemark.2532_g Serpula lacrymans Genemark.2532_g N 0.000
Genemark.2652_g Serpula lacrymans Genemark.2652_g N 0.000
Genemark.3014_g Serpula lacrymans Genemark.3014_g N 0.000
Genemark.3124_g Serpula lacrymans Genemark.3124_g N 0.000
Genemark.4399_g Serpula lacrymans Genemark.4399_g N 0.000
Genemark.469_g Serpula lacrymans Genemark.469_g N 0.000
Genemark.4749_g Serpula lacrymans Genemark.4749_g N 0.000
Genemark.4999_g Serpula lacrymans Genemark.4999_g N 0.000
Genemark.5111_g Serpula lacrymans Genemark.5111_g N 0.000
Genemark.6054_g Serpula lacrymans Genemark.6054_g N 0.000
Genemark.618_g Serpula lacrymans Genemark.618_g N 0.000
Genemark.7257_g Serpula lacrymans Genemark.7257_g N 0.000
Genemark.8022_g Serpula lacrymans Genemark.8022_g N 0.000
Genemark.8882_g Serpula lacrymans Genemark.8882_g N 0.000
Genemark.940_g Serpula lacrymans Genemark.940_g N 0.000
Genemark.9714_g Serpula lacrymans Genemark.9714_g N 0.000
Genemark.983_g Serpula lacrymans Genemark.983_g N 0.000
Minc10827 Meloidogyne incognita Minc10827 N 0.000