CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Genemark.3124_g
(
Serpula lacrymans
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
Genemark.3124_g
T15725_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Genemark.3124_g
CCHC ZF
57
74
FTCYNCGEEGHMAQNCTN
Links
Other
CCHC ZF
family RBPs
Other
Serpula lacrymans
RBPs
24 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Genemark.940_g
Serpula lacrymans
Genemark.940_g
N
1.000
Genemark.12199_g
Serpula lacrymans
Genemark.12199_g
N
0.833
Genemark.10975_g
Serpula lacrymans
Genemark.10975_g
N
0.833
Genemark.7257_g
Serpula lacrymans
Genemark.7257_g
N
0.833
Genemark.75_g
Serpula lacrymans
Genemark.75_g
N
0.833
Genemark.12122_g
Serpula lacrymans
Genemark.12122_g
N
0.778
Genemark.469_g
Serpula lacrymans
Genemark.469_g
N
0.778
Genemark.12016_g
Serpula lacrymans
Genemark.12016_g
N
0.778
Genemark.1877_g
Serpula lacrymans
Genemark.1877_g
N
0.778
Genemark.8882_g
Serpula lacrymans
Genemark.8882_g
N
0.778
Genemark.11813_g
Serpula lacrymans
Genemark.11813_g
N
0.778
Genemark.6548_g
Serpula lacrymans
Genemark.6548_g
N
0.778
Genemark.2320_g
Serpula lacrymans
Genemark.2320_g
N
0.778
Genemark.6054_g
Serpula lacrymans
Genemark.6054_g
N
0.778
Genemark.3014_g
Serpula lacrymans
Genemark.3014_g
N
0.722
Genemark.2652_g
Serpula lacrymans
Genemark.2652_g
N
0.722
Genemark.983_g
Serpula lacrymans
Genemark.983_g
N
0.722
Genemark.618_g
Serpula lacrymans
Genemark.618_g
N
0.722
Genemark.4749_g
Serpula lacrymans
Genemark.4749_g
N
0.722
Genemark.8022_g
Serpula lacrymans
Genemark.8022_g
N
0.722
Genemark.4399_g
Serpula lacrymans
Genemark.4399_g
N
0.722
Genemark.10526_g
Serpula lacrymans
Genemark.10526_g
N
0.722
Genemark.446_g
Serpula lacrymans
Genemark.446_g
N
0.722
Genemark.11049_g
Serpula lacrymans
Genemark.11049_g
N
0.722