RO3G_08915 (Rhizopus oryzae)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 RO3G_08915 T01555_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
RO3T_08914 CCCH ZF 91 116
RO3T_08914 CCCH ZF 174 194

Links

Other CCCH ZF family RBPs
Other Rhizopus oryzae RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AMAG_12737 Allomyces macrogynus AMAG_12737 N 0.702
Cd36_81440 Candida dubliniensis Cd36_81440 N 0.723
EAT85557.1 Phaeosphaeria nodorum EAT85557.1 N 0.771
EEB90926.1 Moniliophthora perniciosa EEB90926.1 N 0.745
estExt_fgenesh1_pg.C_120215 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_120215 N 0.792
estExt_fgenesh1_pm.C_120035 Schizophyllum commune estExt_fgenesh1_pm.C_120035 N 0.750
estExt_Genewise1.C_31474 Agaricus bisporus estExt_Genewise1.C_31474 N 0.750
e_gw1.132.32.1 Postia placenta e_gw1.132.32.1 N 0.729
e_gwh1.21.47.1 Laccaria bicolor e_gwh1.21.47.1 N 0.708
fgenesh2_kg.7_#_69_#_840_2_CFPN Serpula lacrymans fgenesh2_kg.7_#_69_#_840_2_CFPN N 0.708
GSTUMT00005826001 Tuber melanosporum GSTUMT00005826001 N 0.766
PTRG_00525 Pyrenophora tritici repentis PTRG_00525 N 0.750
Sjc_0049010 Schistosoma japonicum Sjc_0049010 N 0.750
Smp_099900 Schistosoma mansoni Smp_099900 N 0.729
SNOG_06906 Stagonospora nodorum SNOG_06906 N 0.771
XP_001191490.1 Strongylocentrotus purpuratus XP_001191490.1 N 0.729
XP_002493623.1 Pichia pastoris XP_002493623.1 N 0.729
XP_785608.2 Strongylocentrotus purpuratus XP_785608.2 N 0.729