XP_002493623.1 (Pichia pastoris)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 XP_002493623.1 T06653_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
XP_002493623.1 CCCH ZF 97 122
XP_002493623.1 CCCH ZF 185 205

Links

Other CCCH ZF family RBPs
Other Pichia pastoris RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Smp_099900 Schistosoma mansoni Smp_099900 N 0.809
Cd36_81440 Candida dubliniensis Cd36_81440 N 0.792
Sjc_0049010 Schistosoma japonicum Sjc_0049010 N 0.787
EAT85557.1 Phaeosphaeria nodorum EAT85557.1 N 0.771
SNOG_06906 Stagonospora nodorum SNOG_06906 N 0.771
XP_001191490.1 Strongylocentrotus purpuratus XP_001191490.1 N 0.745
XP_785608.2 Strongylocentrotus purpuratus XP_785608.2 N 0.745
GSTUMT00005826001 Tuber melanosporum GSTUMT00005826001 N 0.729
RO3G_08915 Rhizopus oryzae RO3G_08915 N 0.729
GE22859 Drosophila yakuba FBgn0240063 N 0.723
estExt_Genewise1.C_350015 Capitella teleta estExt_Genewise1.C_350015 N 0.723
GJ20510 Drosophila virilis FBgn0207650 N 0.723
GL11672 Drosophila persimilis FBgn0149281 N 0.723
GA21225-RA Drosophila pseudoobscura FBgn0081213 N 0.723
CG8635 Drosophila melanogaster FBgn0033317 N 0.723
AAEL010535 Aedes aegypti AAEL010535 N 0.723
PTRG_00525 Pyrenophora tritici repentis PTRG_00525 N 0.723
GF12572 Drosophila ananassae FBgn0089609 N 0.723
GG10627 Drosophila erecta FBgn0102935 N 0.723
GI20775 Drosophila mojavensis FBgn0143510 N 0.723
GM20672 Drosophila sechellia FBgn0175554 N 0.723
GH21804 Drosophila grimshawi FBgn0129265 N 0.723
mgf000781m Mimulus guttatus mgf000781m N 0.702
estExt_fgenesh1_pg.C_120215 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_120215 N 0.702