SNOG_06906 (Stagonospora nodorum)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 SNOG_06906 T01576_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SNOT_06906 CCCH ZF 92 117
SNOT_06906 CCCH ZF 184 205

Links

Other CCCH ZF family RBPs
Other Stagonospora nodorum RBPs

20 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
EAT85557.1 Phaeosphaeria nodorum EAT85557.1 N 1.000
PTRG_00525 Pyrenophora tritici repentis PTRG_00525 N 0.896
Cd36_81440 Candida dubliniensis Cd36_81440 N 0.812
RO3G_08915 Rhizopus oryzae RO3G_08915 N 0.771
XP_002493623.1 Pichia pastoris XP_002493623.1 N 0.771
GSTUMT00005826001 Tuber melanosporum GSTUMT00005826001 N 0.750
AO090113000083 Aspergillus oryzae CADAORAG00011692 N 0.729
AFLA_095620 Aspergillus flavus CADAFLAG00009247 N 0.729
estExt_Genewise1.C_31474 Agaricus bisporus estExt_Genewise1.C_31474 N 0.729
FOXG_12762 Fusarium oxysporum FOXG_12762 N 0.708
FVEG_11503 Fusarium verticillioides FVEG_11503 N 0.708
e_gwh1.21.47.1 Laccaria bicolor e_gwh1.21.47.1 N 0.708
FGSG_10829 Fusarium graminearum FGSG_10829 N 0.708
GLRG_05139 Colletotrichum graminicola GLRG_05139 N 0.708
mgf000781m Mimulus guttatus mgf000781m N 0.708
fgenesh2_kg.7_#_69_#_840_2_CFPN Serpula lacrymans fgenesh2_kg.7_#_69_#_840_2_CFPN N 0.708
Smp_099900 Schistosoma mansoni Smp_099900 N 0.708
XP_001191490.1 Strongylocentrotus purpuratus XP_001191490.1 N 0.708
estExt_fgenesh2_pm.C_110045 Heterobasidion annosum estExt_fgenesh2_pm.C_110045 N 0.708
XP_785608.2 Strongylocentrotus purpuratus XP_785608.2 N 0.708