Trmt1 (Dipodomys ordii)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSDORG00000014298 T02516_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000013446 CCCH ZF 598 622

Links

Other CCCH ZF family RBPs
Other Dipodomys ordii RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R009204 Ailuropoda melanoleuca Ame_R009204 N 0.731
A6QP09_BOVIN Bos taurus ENSBTAG00000019325 N 0.731
TRMT1 Canis familiaris ENSCAFG00000017070 N 0.731
LOC100389881 Callithrix jacchus ENSCJAG00000004566 N 0.808
TRMT1 Cavia porcellus ENSCPOG00000011754 N 0.800
TRMT1 Echinops telfairi ENSETEG00000015483 N 0.760
TRMT1 Felis catus ENSFCAG00000000483 N 0.769
TRMT1 Homo sapiens ENSG00000104907 N 0.808
TRMT1 Gorilla gorilla ENSGGOG00000014007 N 0.808
TRMT1 Loxodonta africana ENSLAFG00000014072 N 0.769
TRMT1 Microcebus murinus ENSMICG00000000793 N 0.769
TRMT1 Myotis lucifugus ENSMLUG00000012809 N 0.769
TRMT1 Macaca mulatta ENSMMUG00000001167 N 0.808
Trmt1 Mus musculus ENSMUSG00000001909 N 0.769
TRMT1 Procavia capensis ENSPCAG00000003698 N 0.731
ENSPPYG00000009622 Pongo pygmaeus ENSPPYG00000009622 N 0.808
TRMT1 Pan troglodytes ENSPTRG00000010557 N 0.808
TRMT1 Pteropus vampyrus ENSPVAG00000015076 N 0.769
Trmt1 Rattus norvegicus ENSRNOG00000002914 N 0.769
TRMT1 Sus scrofa ENSSSCG00000013744 N 0.769
TRMT1 Tursiops truncatus ENSTTRG00000006379 N 0.769