CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TRMT1
(
Felis catus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSFCAG00000000483
T02600_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000000448
CCCH ZF
595
620
LKTFPCKRFKEGTCQRGEQCCYSHSP
Links
Other
CCCH ZF
family RBPs
Other
Felis catus
RBPs
21 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TRMT1
Tursiops truncatus
ENSTTRG00000006379
N
1.000
ENSPPYG00000009622
Pongo pygmaeus
ENSPPYG00000009622
N
0.962
TRMT1
Pan troglodytes
ENSPTRG00000010557
N
0.962
TRMT1
Gorilla gorilla
ENSGGOG00000014007
N
0.962
TRMT1
Macaca mulatta
ENSMMUG00000001167
N
0.962
TRMT1
Homo sapiens
ENSG00000104907
N
0.962
LOC100389881
Callithrix jacchus
ENSCJAG00000004566
N
0.923
A6QP09_BOVIN
Bos taurus
ENSBTAG00000019325
N
0.923
Trmt1
Rattus norvegicus
ENSRNOG00000002914
N
0.923
TRMT1
Sus scrofa
ENSSSCG00000013744
N
0.923
TRMT1
Pteropus vampyrus
ENSPVAG00000015076
N
0.923
TRMT1
Loxodonta africana
ENSLAFG00000014072
N
0.923
TRMT1
Microcebus murinus
ENSMICG00000000793
N
0.923
Trmt1
Mus musculus
ENSMUSG00000001909
N
0.923
TRMT1
Myotis lucifugus
ENSMLUG00000012809
N
0.885
TRMT1
Canis familiaris
ENSCAFG00000017070
N
0.885
TRMT1
Procavia capensis
ENSPCAG00000003698
N
0.885
Ame_R009204
Ailuropoda melanoleuca
Ame_R009204
N
0.885
Trmt1
Dipodomys ordii
ENSDORG00000014298
N
0.769
TRMT1
Cavia porcellus
ENSCPOG00000011754
N
0.769
TRMT1
Echinops telfairi
ENSETEG00000015483
N
0.731