TRMT1 (Echinops telfairi)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSETEG00000015483 T02591_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000012550 CCCH ZF 602 626

Links

Other CCCH ZF family RBPs
Other Echinops telfairi RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R009204 Ailuropoda melanoleuca Ame_R009204 N 0.846
TRMT1 Cavia porcellus ENSCPOG00000011754 N 0.840
TRMT1 Sus scrofa ENSSSCG00000013744 N 0.808
TRMT1 Loxodonta africana ENSLAFG00000014072 N 0.808
LOC100389881 Callithrix jacchus ENSCJAG00000004566 N 0.808
TRMT1 Pan troglodytes ENSPTRG00000010557 N 0.769
Trmt1 Rattus norvegicus ENSRNOG00000002914 N 0.769
TRMT1 Procavia capensis ENSPCAG00000003698 N 0.769
TRMT1 Canis familiaris ENSCAFG00000017070 N 0.769
ENSPPYG00000009622 Pongo pygmaeus ENSPPYG00000009622 N 0.769
TRMT1 Gorilla gorilla ENSGGOG00000014007 N 0.769
TRMT1 Macaca mulatta ENSMMUG00000001167 N 0.769
TRMT1 Homo sapiens ENSG00000104907 N 0.769
Trmt1 Mus musculus ENSMUSG00000001909 N 0.769
TRMT1 Oryzias latipes ENSORLG00000020074 N 0.760
Trmt1 Dipodomys ordii ENSDORG00000014298 N 0.760
A6QP09_BOVIN Bos taurus ENSBTAG00000019325 N 0.731
TRMT1 Tursiops truncatus ENSTTRG00000006379 N 0.731
TRMT1 Pteropus vampyrus ENSPVAG00000015076 N 0.731
TRMT1 Microcebus murinus ENSMICG00000000793 N 0.731
TRMT1 Myotis lucifugus ENSMLUG00000012809 N 0.731
TRMT1 Felis catus ENSFCAG00000000483 N 0.731
TRMT1 Gasterosteus aculeatus ENSGACG00000000227 N 0.720