ZGPAT (Tetraodon nigroviridis)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSTNIG00000004165 T03480_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000006786 CCCH ZF 169 193

Links

Other CCCH ZF family RBPs
Other Tetraodon nigroviridis RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R014267 Ailuropoda melanoleuca Ame_R014267 N 0.760
ZGPAT_BOVIN Bos taurus ENSBTAG00000007498 N 0.720
ZGPAT Canis familiaris ENSCAFG00000013056 N 0.840
ZGPAT Callithrix jacchus ENSCJAG00000010398 N 0.760
ZGPAT Cavia porcellus ENSCPOG00000014427 N 0.760
zgpat Danio rerio ENSDARG00000027403 N 0.808
ZGPAT Dasypus novemcinctus ENSDNOG00000025874 N 0.760
ZGPAT Felis catus ENSFCAG00000001173 N 0.760
ZGPAT Homo sapiens ENSG00000197114 N 0.760
ZGPAT Gorilla gorilla ENSGGOG00000004801 N 0.760
LOC719499 Macaca mulatta ENSMMUG00000000171 N 0.760
ZGPAT Monodelphis domestica ENSMODG00000017016 N 0.760
Zgpat Mus musculus ENSMUSG00000027582 N 0.760
ZGPAT Ornithorhynchus anatinus ENSOANG00000004932 N 0.760
ZGPAT Otolemur garnettii ENSOGAG00000004502 N 0.760
ZGPAT Procavia capensis ENSPCAG00000001883 N 0.760
ENSPPYG00000011246 Pongo pygmaeus ENSPPYG00000011246 N 0.760
ZGPAT Pan troglodytes ENSPTRG00000013750 N 0.760
Lime1 Rattus norvegicus ENSRNOG00000014235 N 0.760
ZGPAT Spermophilus tridecemlineatus ENSSTOG00000011986 N 0.840
ZGPAT Takifugu rubripes ENSTRUG00000010488 N 0.962
ZGPAT Tursiops truncatus ENSTTRG00000012223 N 0.800