SB05G013190 (Sorghum bicolor)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 Sb05g013190 T04120_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb05g013190.1 CCCH ZF 59 84
Sb05g013190.1 CCCH ZF 104 129
Sb05g013190.1 CCCH ZF 150 175
Sb05g013190.1 CCCH ZF 311 337
Sb05g013190.1 CCCH ZF 357 383

Links

Other CCCH ZF family RBPs
Other Sorghum bicolor RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCAFG00000017850 Canis familiaris ENSCAFG00000017850 N 0.000
LOC100390255 Callithrix jacchus ENSCJAG00000008219 N 0.000
ENSCPOG00000015241 Cavia porcellus ENSCPOG00000015241 N 0.000
ENSCPOG00000022820 Cavia porcellus ENSCPOG00000022820 N 0.000
LOC100061605 Equus caballus ENSECAG00000009237 N 0.000
ENSETEG00000013951 Echinops telfairi ENSETEG00000013951 N 0.000
ENSFCAG00000012074 Felis catus ENSFCAG00000012074 N 0.000
TEX13A Homo sapiens ENSG00000133149 N 0.000
TEX13A Gorilla gorilla ENSGGOG00000003783 N 0.000
ENSLAFG00000007090 Loxodonta africana ENSLAFG00000007090 N 0.000
ENSMICG00000014355 Microcebus murinus ENSMICG00000014355 N 0.000
TEX13A Macaca mulatta ENSMMUG00000006684 N 0.000
TEX13B Macaca mulatta ENSMMUG00000007185 N 0.000
Tex13a Mus musculus ENSMUSG00000071686 N 0.000
ENSPPYG00000020598 Pongo pygmaeus ENSPPYG00000020598 N 0.000
TEX13A Pan troglodytes ENSPTRG00000022142 N 0.000
ENSPVAG00000003750 Pteropus vampyrus ENSPVAG00000003750 N 0.000
LOC100365644 Rattus norvegicus ENSRNOG00000026712 N 0.000
ENSSARG00000009668 Sorex araneus ENSSARG00000009668 N 0.000
ENSSSCG00000012544 Sus scrofa ENSSSCG00000012544 N 0.000
ENSSSCG00000012565 Sus scrofa ENSSSCG00000012565 N 0.000