estExt_fgenesh1_pg.C_120215 (Batrachochytrium dendrobatidis)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 estExt_fgenesh1_pg.C_120215 T04988_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_120215 CCCH ZF 93 118
estExt_fgenesh1_pg.C_120215 CCCH ZF 180 200

Links

Other CCCH ZF family RBPs
Other Batrachochytrium dendrobatidis RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL010535 Aedes aegypti AAEL010535 N 0.702
AGAP008634 Anopheles gambiae AGAP008634 N 0.702
estExt_fgenesh1_pm.C_120035 Schizophyllum commune estExt_fgenesh1_pm.C_120035 N 0.766
estExt_Genewise1.C_31474 Agaricus bisporus estExt_Genewise1.C_31474 N 0.766
estExt_Genewise1.C_350015 Capitella teleta estExt_Genewise1.C_350015 N 0.745
e_gw1.132.32.1 Postia placenta e_gw1.132.32.1 N 0.766
CG8635 Drosophila melanogaster FBgn0033317 N 0.723
GA21225-RA Drosophila pseudoobscura FBgn0081213 N 0.723
GF12572 Drosophila ananassae FBgn0089609 N 0.723
GG10627 Drosophila erecta FBgn0102935 N 0.723
GH21804 Drosophila grimshawi FBgn0129265 N 0.723
GI20775 Drosophila mojavensis FBgn0143510 N 0.723
GL11672 Drosophila persimilis FBgn0149281 N 0.723
GJ20510 Drosophila virilis FBgn0207650 N 0.723
GE22859 Drosophila yakuba FBgn0240063 N 0.723
fgenesh2_kg.7_#_69_#_840_2_CFPN Serpula lacrymans fgenesh2_kg.7_#_69_#_840_2_CFPN N 0.787
fgenesh2_pg.scaffold_616000019 Branchiostoma floridae fgenesh2_pg.scaffold_616000019 N 0.000
PTRG_00525 Pyrenophora tritici repentis PTRG_00525 N 0.723
Sjc_0049010 Schistosoma japonicum Sjc_0049010 N 0.745
Smp_099900 Schistosoma mansoni Smp_099900 N 0.723
XP_001191490.1 Strongylocentrotus purpuratus XP_001191490.1 N 0.787
XP_002493623.1 Pichia pastoris XP_002493623.1 N 0.702
XP_785608.2 Strongylocentrotus purpuratus XP_785608.2 N 0.787