CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
nasonia_NCBI_hmm446504
(
Nasonia vitripennis
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
nasonia_NCBI_hmm446504
T09188_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
nasonia_NCBI_hmm446504
CCHC ZF
44
61
ALCYNCNKPGHFKRDCPE
Links
Other
CCHC ZF
family RBPs
Other
Nasonia vitripennis
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GID1.0038261
Dictyostelium purpureum
GID1.0038261
N
0.722
nasonia_NCBI_hmm124074
Nasonia vitripennis
nasonia_NCBI_hmm124074
N
0.944
nasonia_NCBI_hmm178904
Nasonia vitripennis
nasonia_NCBI_hmm178904
N
0.889
nasonia_NCBI_hmm194364
Nasonia vitripennis
nasonia_NCBI_hmm194364
N
0.722
nasonia_NCBI_hmm300934
Nasonia vitripennis
nasonia_NCBI_hmm300934
N
0.944
nasonia_NCBI_hmm41214
Nasonia vitripennis
nasonia_NCBI_hmm41214
N
1.000
nasonia_NCBI_hmm56394
Nasonia vitripennis
nasonia_NCBI_hmm56394
N
1.000
nasonia_NCBI_hmm98034
Nasonia vitripennis
nasonia_NCBI_hmm98034
N
0.944
PK00617.1
Cannabis sativa
PK00617.1
N
0.722
PK01187.1
Cannabis sativa
PK01187.1
N
0.722