PK01187.1 (Cannabis sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 PK01187.1 T08768_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK01187.1 CCHC ZF 247 263

Links

Other CCHC ZF family RBPs
Other Cannabis sativa RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK00617.1 Cannabis sativa PK00617.1 N 0.941
PK07703.1 Cannabis sativa PK07703.1 N 0.882
PK18721.1 Cannabis sativa PK18721.1 N 0.765
PK25691.1 Cannabis sativa PK25691.1 N 0.765
Glyma11g10610.1 Glycine max Glyma11g10610.1 N 0.765
estExt_fgenesh1_pg.C_5350001 Physcomitrella patens estExt_fgenesh1_pg.C_5350001 N 0.722
Minc07977 Meloidogyne incognita Minc07977 N 0.722
nasonia_NCBI_hmm56394 Nasonia vitripennis nasonia_NCBI_hmm56394 N 0.722
nasonia_NCBI_hmm41214 Nasonia vitripennis nasonia_NCBI_hmm41214 N 0.722
nasonia_NCBI_hmm446504 Nasonia vitripennis nasonia_NCBI_hmm446504 N 0.722
DGIL_AUG5s10606g6t1 Acyrtosiphon pisum DGIL_AUG5s10606g6t1 N 0.706
Glyma12g02890.1 Glycine max Glyma12g02890.1 N 0.706
ENSTNIG00000001528 Tetraodon nigroviridis ENSTNIG00000001528 N 0.706
Medtr4g100980 Medicago truncatula Medtr4g100980 N 0.706