LOC_Os01g63080 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os01g63080 T10846_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os01g63080.1 CCHC ZF 579 596

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

634 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT3G12130 Arabidopsis thaliana AT3G12130-TAIR-G N 0.000
AT5G06770 Arabidopsis thaliana AT5G06770-TAIR-G N 0.000
Cucsa.242740 Cucumis sativus Cucsa.242740 N 0.000
Cucsa.263980 Cucumis sativus Cucsa.263980 N 0.000
XM_002884838.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3001010 N 0.000
XM_002873232.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6000515 N 0.000
GRMZM2G071034 Zea mays GRMZM2G071034 N 0.000
GRMZM2G124476 Zea mays GRMZM2G124476 N 0.000
GSVIVG00025360001 Vitis vinifera GSVIVG00025360001 N 0.000
GSVIVG00033508001 Vitis vinifera GSVIVG00033508001 N 0.000
LOC_Os04g57010 Oryza sativa LOC_Os04g57010 N 0.000
MDP0000263392 Malus x domestica MDP0000263392 N 0.000
PDK_20s1321721g007 Phoenix dactylifera PDK_20s1321721g007 N 0.000
B9GLM3_POPTR Populus trichocarpa POPTR_0001s05070 N 0.000
B9GYL2_POPTR Populus trichocarpa POPTR_0003s21780 N 0.000
B9HAC6_POPTR Populus trichocarpa POPTR_0006s20620 N 0.000