LOC_Os05g26470 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os05g26470 T11509_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os05g26470.1 CCHC ZF 276 293

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

598 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ARB_01970 Arthroderma benhamiae ARB_01970 N 0.000
BDBG_02075 Blastomyces dermatitidis BDBG_02075 N 0.000
AFLA_128590 Aspergillus flavus CADAFLAG00009917 N 0.000
AFUA_6G08820 Aspergillus fumigatus CADAFUAG00001582 N 0.000
An11g06210 Aspergillus niger CADANGAG00008954 N 0.000
ANIA_10228 Aspergillus nidulans CADANIAG00008371 N 0.000
AO090001000554 Aspergillus oryzae CADAORAG00000508 N 0.000
ATEG_06631 Aspergillus terreus CADATEAG00009109 N 0.000
NFIA_054470 Neosartorya fischeri CADNFIAG00005274 N 0.000
CIMG_01358 Coccidioides immitis CIMG_01358 N 0.000
CPSG_01825 Coccidioides posadasii CPSG_01825 N 0.000
fgenesh1_pg.00118_#_293 Aspergillus carbonarius fgenesh1_pg.00118_#_293 N 0.000
HCAG_05763 Histoplasma capsulatum HCAG_05763 N 0.000
MCYG_00552 Microsporum canis MCYG_00552 N 0.000
MGYG_01410 Microsporum gypseum MGYG_01410 N 0.000
PABG_01879 Paracoccidioides brasiliensis PABG_01879 N 0.000
Pc12g08810 Penicillium chrysogenum Pc12g08810 N 0.000
PMAA_064610 Penicillium marneffei PMAA_064610 N 0.000
TEQG_06760 Trichophyton equinum TEQG_06760 N 0.000
TERG_00095 Trichophyton rubrum TERG_00095 N 0.000
TESG_08570 Trichophyton tonsurans TESG_08570 N 0.000
TRV_07199 Trichophyton verrucosum TRV_07199 N 0.000
UREG_01281 Uncinocarpus reesii UREG_01281 N 0.000