LOC_Os05g51890 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os05g51890 T11552_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os05g51890.1 CCHC ZF 199 214
LOC_Os05g51890.1 CCHC ZF 235 251
LOC_Os05g51890.1 CCHC ZF 332 349

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

6 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
12269_YJL010C Saccharomyces paradoxus 12269_YJL010C N 0.000
A7TH34_VANPO Vanderwaltozyma polyspora A7TH34_VANPO N 0.000
ACR046W Ashbya gossypii ACR046W N 0.000
CAGL0E06534g Candida glabrata CAGL0E06534g N 0.000
KLTH0G07612g Kluyveromyces thermotolerans KLTH0G07612g N 0.000
Kwal_2861 Kluyveromyces waltii Kwal_2861 N 0.000
NOP9 Saccharomyces cerevisiae YJL010C N 0.000
ZYRO0A10648g Zygosaccharomyces rouxii ZYRO0A10648g N 0.000