CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZYRO0A10648g
(
Zygosaccharomyces rouxii
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
ZYRO0A10648g
T25281_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ZYRO0A10648g
PUF
86
120
ETRGKELKLVISQICSKLMERLILDCDDQQLKSIF
ZYRO0A10648g
PUF
122
157
AFNGVFYNLSCHKYASHVLETLLVRGAALVEKELLT
ZYRO0A10648g
PUF
182
212
EVKPHLKAMINHRYASHVLRLLILILASKNL
ZYRO0A10648g
PUF
281
314
YVTKFRELCVDPVASPVIQLIIQVEGIFDRERSF
ZYRO0A10648g
PUF
328
362
KEEAFLEYLLSDPVGSHFLENVISFARTKFVERLY
ZYRO0A10648g
PUF
365
400
YMKPKITKLAQRDTTGAFVVQALLRHLKDKEVKEIL
ZYRO0A10648g
PUF
547
579
KDVVNMSCNAYGSHIVDKLWEFTAKLTLYKERI
Links
Other
PUF
family RBPs
Other
Zygosaccharomyces rouxii
RBPs
8 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
12269_YJL010C
Saccharomyces paradoxus
12269_YJL010C
N
0.803
CAGL0E06534g
Candida glabrata
CAGL0E06534g
N
0.795
NOP9
Saccharomyces cerevisiae
YJL010C
N
0.791
A7TH34_VANPO
Vanderwaltozyma polyspora
A7TH34_VANPO
N
0.790
ACR046W
Ashbya gossypii
ACR046W
N
0.765
Kwal_2861
Kluyveromyces waltii
Kwal_2861
N
0.738
KLTH0G07612g
Kluyveromyces thermotolerans
KLTH0G07612g
N
0.738
KLLA0E13685g
Kluyveromyces lactis
KLLA0E13685g
N
0.721