CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
CAGL0E06534g
(
Candida glabrata
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
CAGL0E06534g
T25047_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAGL0E06534g
PUF
87
121
EAEGKELKLVTSQICSKLMERLILNCNDIQLKKLF
CAGL0E06534g
PUF
123
158
AFNGNFYNISCHKYASHVVETLLVRSASLVEKELIT
CAGL0E06534g
PUF
187
217
EIKPHLKSMINHQYASHVLRLIILILSSKTL
CAGL0E06534g
PUF
285
319
TVITKFREFCVDKVASPVIQLIIQVEGIFDRDRSF
CAGL0E06534g
PUF
333
367
KEQSFMEYLLSDPVGSHFLENVISFAKTKYVERLY
CAGL0E06534g
PUF
370
405
YIKDQIVRLAKRDTTGAFVIQSLLKNMKDKEVKEIL
CAGL0E06534g
PUF
549
584
ILIKDIVKLACNAYGSHIVDKLWDFTAKLTLYKERI
Links
Other
PUF
family RBPs
Other
Candida glabrata
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZYRO0A10648g
Zygosaccharomyces rouxii
ZYRO0A10648g
N
0.795
12269_YJL010C
Saccharomyces paradoxus
12269_YJL010C
N
0.787
NOP9
Saccharomyces cerevisiae
YJL010C
N
0.787
ACR046W
Ashbya gossypii
ACR046W
N
0.779
A7TH34_VANPO
Vanderwaltozyma polyspora
A7TH34_VANPO
N
0.779
KLLA0E13685g
Kluyveromyces lactis
KLLA0E13685g
N
0.705