LOC_Os10g10660 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os10g10660 T12207_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os10g10660.1 CCHC ZF 445 462

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

70 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB02569.1 Alternaria brassicicola AB02569.1 N 0.000
ARB_05996 Arthroderma benhamiae ARB_05996 N 0.000
BC1G_07906 Botrytis cinerea BC1G_07906 N 0.000
BDBG_08699 Blastomyces dermatitidis BDBG_08699 N 0.000
ACLA_054770 Aspergillus clavatus CADACLAG00005233 N 0.000
AFLA_041240 Aspergillus flavus CADAFLAG00005451 N 0.000
An14g01580 Aspergillus niger CADANGAG00011093 N 0.000
ANIA_07145 Aspergillus nidulans CADANIAG00000312 N 0.000
AO090011000290 Aspergillus oryzae CADAORAG00005058 N 0.000
ATEG_02173 Aspergillus terreus CADATEAG00000030 N 0.000
NFIA_029780 Neosartorya fischeri CADNFIAG00002898 N 0.000
CIMG_08445 Coccidioides immitis CIMG_08445 N 0.000
CPSG_08272 Coccidioides posadasii CPSG_08272 N 0.000
estExt_Genewise1.C_50279 Cochliobolus heterostrophus C5 estExt_Genewise1.C_50279 N 0.000
fgenesh1_pg.00795_#_104 Aspergillus carbonarius fgenesh1_pg.00795_#_104 N 0.000
HCAG_07565 Histoplasma capsulatum HCAG_07565 N 0.000
MCYG_02745 Microsporum canis MCYG_02745 N 0.000
MGYG_08476 Microsporum gypseum MGYG_08476 N 0.000
PABG_03629 Paracoccidioides brasiliensis PABG_03629 N 0.000
Pc12g14830 Penicillium chrysogenum Pc12g14830 N 0.000
PMAA_006050 Penicillium marneffei PMAA_006050 N 0.000
PTRG_08575 Pyrenophora tritici repentis PTRG_08575 N 0.000
SS1G_03468 Sclerotinia sclerotiorum SS1G_03468 N 0.000
TEQG_04110 Trichophyton equinum TEQG_04110 N 0.000
TERG_05432 Trichophyton rubrum TERG_05432 N 0.000
TESG_01774 Trichophyton tonsurans TESG_01774 N 0.000
TRV_06346 Trichophyton verrucosum TRV_06346 N 0.000
UREG_02520 Uncinocarpus reesii UREG_02520 N 0.000
VDAG_01644 Verticillium dahliae VDAG_01644 N 0.000