EFA77462.1 (Polysphondylium pallidum)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 EFA77462.1 T15059_0.6 NCBI (2013-Jan-11)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
EFA77462.1 CCHC ZF 213 230

Links

Other CCHC ZF family RBPs
Other Polysphondylium pallidum RBPs

2 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30072.m000978 Ricinus communis 30072.m000978 N 0.000
AT5G32450 Arabidopsis thaliana AT5G32450-TAIR-G N 0.000
BRADI1G08597 Brachypodium distachyon BRADI1G08597 N 0.000
cassava22591.valid.m1 Manihot esculenta cassava22591.valid.m1 N 0.000
cassava22592.valid.m1 Manihot esculenta cassava22592.valid.m1 N 0.000
cassava23957.valid.m1 Manihot esculenta cassava23957.valid.m1 N 0.000
cassava25979.m1 Manihot esculenta cassava25979.m1 N 0.000
Cucsa.017340 Cucumis sativus Cucsa.017340 N 0.000
Cucsa.334810 Cucumis sativus Cucsa.334810 N 0.000
XM_002868345.1 Arabidopsis lyrata fgenesh2_kg.7__3000__AT5G32450.1 N 0.000
Glyma16g04290.1 Glycine max Glyma16g04290.1 N 0.000
LOC_Os03g53770 Oryza sativa LOC_Os03g53770 N 0.000
MDP0000120510 Malus x domestica MDP0000120510 N 0.000
Medtr7g102810 Medicago truncatula Medtr7g102810 N 0.000
mgf006334m Mimulus guttatus mgf006334m N 0.000
PDK_20s1386251g001 Phoenix dactylifera PDK_20s1386251g001 N 0.000
PK10346.1 Cannabis sativa PK10346.1 N 0.000
B9I5V6_POPTR Populus trichocarpa POPTR_0013s05190 N 0.000
B9IPS4_POPTR Populus trichocarpa POPTR_0019s05350 N 0.000
ppa009644m Prunus persica ppa009644m N 0.000
ppa009902m Prunus persica ppa009902m N 0.000