Cucsa.017340 (Cucumis sativus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Cucsa.017340 T49516_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.017340.1 RRM 8 74

Links

Other RRM family RBPs
Other Cucumis sativus RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava23957.valid.m1 Manihot esculenta cassava23957.valid.m1 N 0.881
PK10346.1 Cannabis sativa PK10346.1 N 0.866
Cucsa.334810 Cucumis sativus Cucsa.334810 N 0.866
XM_002868345.1 Arabidopsis lyrata fgenesh2_kg.7__3000__AT5G32450.1 N 0.851
AT5G32450 Arabidopsis thaliana AT5G32450-TAIR-G N 0.851
30072.m000978 Ricinus communis 30072.m000978 N 0.838
mgf006334m Mimulus guttatus mgf006334m N 0.836
ppa009644m Prunus persica ppa009644m N 0.821
cassava22591.valid.m1 Manihot esculenta cassava22591.valid.m1 N 0.821
cassava22592.valid.m1 Manihot esculenta cassava22592.valid.m1 N 0.821
ppa009902m Prunus persica ppa009902m N 0.821
cassava25979.m1 Manihot esculenta cassava25979.m1 N 0.821
B9I5V6_POPTR Populus trichocarpa POPTR_0013s05190 N 0.806
B9IPS4_POPTR Populus trichocarpa POPTR_0019s05350 N 0.806
Medtr7g102810 Medicago truncatula Medtr7g102810 N 0.794
MDP0000120510 Malus x domestica MDP0000120510 N 0.794
Glyma16g04290.1 Glycine max Glyma16g04290.1 N 0.791
GSVIVG00022464001 Vitis vinifera GSVIVG00022464001 N 0.776
PDK_20s1386251g001 Phoenix dactylifera PDK_20s1386251g001 N 0.731