CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
CARHSP1
(
Anolis carolinensis
)
CSD
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00313 (CSD)
IPR002059
ENSACAG00000006749
T16749_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000006591
CSD
39
106
TYKGVCKCFSRAKGHGFITPEEGGLDVFVHISDIEGEYVPVAGDEMTYKLTTVPPKNDRLQAVEVVIT
Links
Other
CSD
family RBPs
Other
Anolis carolinensis
RBPs
40 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAH84399
Xenopus laevis
AAH84399
N
0.750
Ame_R007806
Ailuropoda melanoleuca
Ame_R007806
N
0.750
Q2NKU4_BOVIN
Bos taurus
ENSBTAG00000001441
N
0.735
CARHSP1
Canis familiaris
ENSCAFG00000019003
N
0.750
LOC100410498
Callithrix jacchus
ENSCJAG00000017286
N
0.750
LOC100395892
Callithrix jacchus
ENSCJAG00000022227
N
0.750
CARHSP1
Cavia porcellus
ENSCPOG00000025492
N
0.750
csdc2
Danio rerio
ENSDARG00000041323
N
0.721
CARHSP1
Dasypus novemcinctus
ENSDNOG00000024912
N
0.735
LOC100051399
Equus caballus
ENSECAG00000019386
N
0.750
CARHSP1
Echinops telfairi
ENSETEG00000008180
N
0.721
CARHSP1
Felis catus
ENSFCAG00000003289
N
0.706
CARHSP1
Homo sapiens
ENSG00000153048
N
0.750
CSDC2
Gasterosteus aculeatus
ENSGACG00000004665
N
0.706
CARHSP1
Gallus gallus
ENSGALG00000007313
N
0.779
CARHSP1
Loxodonta africana
ENSLAFG00000022498
N
0.706
CARHSP1
Macropus eugenii
ENSMEUG00000016403
N
0.721
ENSMGAG00000008554
Meleagris gallopavo
ENSMGAG00000008554
N
0.779
CARHSP1
Microcebus murinus
ENSMICG00000006185
N
0.735
CARHSP1
Myotis lucifugus
ENSMLUG00000009734
N
0.735
CARHSP1
Macaca mulatta
ENSMMUG00000021565
N
0.750
XM_001367025.1
Monodelphis domestica
ENSMODG00000005721
N
0.721
Carhsp1
Mus musculus
ENSMUSG00000008393
N
0.750
CARHSP1
Ornithorhynchus anatinus
ENSOANG00000008257
N
0.750
CARHSP1
Otolemur garnettii
ENSOGAG00000014708
N
0.735
CARHSP1
Ochotona princeps
ENSOPRG00000010356
N
0.750
CSDC2
Oryzias latipes
ENSORLG00000002636
N
0.706
CSDC2
Oryzias latipes
ENSORLG00000014166
N
0.706
CARHSP1
Procavia capensis
ENSPCAG00000002081
N
0.750
ENSPPYG00000007085
Pongo pygmaeus
ENSPPYG00000007085
N
0.706
CARHSP1
Pan troglodytes
ENSPTRG00000007749
N
0.750
CARHSP1
Pteropus vampyrus
ENSPVAG00000003125
N
0.721
Carhsp1
Rattus norvegicus
ENSRNOG00000002610
N
0.750
CARHSP1
Sus scrofa
ENSSSCG00000007911
N
0.750
CARHSP1
Spermophilus tridecemlineatus
ENSSTOG00000007008
N
0.750
CARHSP1
Tupaia belangeri
ENSTBEG00000005777
N
0.735
CARHSP1
Taeniopygia guttata
ENSTGUG00000004665
N
0.809
CSDC2
Tetraodon nigroviridis
ENSTNIG00000004955
N
0.706
CSDC2
Takifugu rubripes
ENSTRUG00000017020
N
0.721
CARHSP1
Tursiops truncatus
ENSTTRG00000014828
N
0.750