CSDC2 (Oryzias latipes)
CSD

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00313 (CSD) IPR002059 ENSORLG00000014166 T16967_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000017767 CSD 72 139

Links

Other CSD family RBPs
Other Oryzias latipes RBPs

79 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CSDC2 Gasterosteus aculeatus ENSGACG00000007540 N 0.926
CSDC2 Tetraodon nigroviridis ENSTNIG00000004955 N 0.912
CSDC2 Takifugu rubripes ENSTRUG00000017020 N 0.897
CSDC2 Oryzias latipes ENSORLG00000002636 N 0.882
CSDC2 Takifugu rubripes ENSTRUG00000004175 N 0.882
csdc2 Danio rerio ENSDARG00000041323 N 0.868
CSDC2 Tetraodon nigroviridis ENSTNIG00000012937 N 0.868
CSDC2 Gasterosteus aculeatus ENSGACG00000004665 N 0.853
CSDC2 Danio rerio ENSDARG00000068477 N 0.853
CSDC2 Echinops telfairi ENSETEG00000019516 N 0.783
CSDC2 Felis catus ENSFCAG00000003677 N 0.783
CSDC2 Homo sapiens ENSG00000172346 N 0.783
CSDC2 Erinaceus europaeus ENSEEUG00000003639 N 0.783
CSDC2 Sus scrofa ENSSSCG00000000062 N 0.783
CSDC2 Cavia porcellus ENSCPOG00000025372 N 0.783
Csdc2 Dipodomys ordii ENSDORG00000011754 N 0.783
ENSPPYG00000011873 Pongo pygmaeus ENSPPYG00000011873 N 0.783
CSDC2 Loxodonta africana ENSLAFG00000027155 N 0.783
Csdc2 Mus musculus ENSMUSG00000042109 N 0.783
CSDC2 Ochotona princeps ENSOPRG00000010664 N 0.783
CSDC2 Procavia capensis ENSPCAG00000014857 N 0.783
CSDC2 Monodelphis domestica ENSMODG00000016565 N 0.783
CSDC2 Macaca mulatta ENSMMUG00000001852 N 0.783
CSDC2 Macropus eugenii ENSMEUG00000002050 N 0.783
CSDC2 Microcebus murinus ENSMICG00000005978 N 0.783
Q08E16_BOVIN Bos taurus ENSBTAG00000004004 N 0.783
LOC100070658 Equus caballus ENSECAG00000022234 N 0.783
Ame_R018068 Ailuropoda melanoleuca Ame_R018068 N 0.783
Csdc2 Rattus norvegicus ENSRNOG00000005332 N 0.783
CSDC2 Pteropus vampyrus ENSPVAG00000001165 N 0.783
CSDC2 Tursiops truncatus ENSTTRG00000006736 N 0.783
CSDC2 Taeniopygia guttata ENSTGUG00000009898 N 0.783
CSDC2 Tupaia belangeri ENSTBEG00000011596 N 0.783
AAH84399 Xenopus laevis AAH84399 N 0.779
CSDC2 Otolemur garnettii ENSOGAG00000002852 N 0.768
CSDC2 Oryctolagus cuniculus ENSOCUG00000006938 N 0.768
CSDC2 Gallus gallus ENSGALG00000000049 N 0.768
CSDC2 Meleagris gallopavo ENSMGAG00000012131 N 0.768
CSDC2 Myotis lucifugus ENSMLUG00000002495 N 0.768
CSDC2 Anolis carolinensis ENSACAG00000004668 N 0.768
LOC100400889 Callithrix jacchus ENSCJAG00000002580 N 0.768
ENSMGAG00000008554 Meleagris gallopavo ENSMGAG00000008554 N 0.765
CARHSP1 Gallus gallus ENSGALG00000007313 N 0.765
CARHSP1 Gasterosteus aculeatus ENSGACG00000005857 N 0.765
carhsp1 Danio rerio ENSDARG00000053129 N 0.765
LOC100410498 Callithrix jacchus ENSCJAG00000017286 N 0.750
LOC100395892 Callithrix jacchus ENSCJAG00000022227 N 0.750
CARHSP1 Pan troglodytes ENSPTRG00000007749 N 0.750
CARHSP1 Taeniopygia guttata ENSTGUG00000004665 N 0.750
CARHSP1 Tursiops truncatus ENSTTRG00000014828 N 0.750
CARHSP1 Macaca mulatta ENSMMUG00000021565 N 0.750
CARHSP1 Ochotona princeps ENSOPRG00000010356 N 0.750
CARHSP1 Spermophilus tridecemlineatus ENSSTOG00000007008 N 0.750
CARHSP1 Ornithorhynchus anatinus ENSOANG00000008257 N 0.750
Carhsp1 Mus musculus ENSMUSG00000008393 N 0.750
CARHSP1 Canis familiaris ENSCAFG00000019003 N 0.750
CARHSP1 Tetraodon nigroviridis ENSTNIG00000011153 N 0.750
CARHSP1 Cavia porcellus ENSCPOG00000025492 N 0.750
LOC100051399 Equus caballus ENSECAG00000019386 N 0.750
CARHSP1 Homo sapiens ENSG00000153048 N 0.750
CARHSP1 Takifugu rubripes ENSTRUG00000010962 N 0.750
Carhsp1 Rattus norvegicus ENSRNOG00000002610 N 0.750
Ame_R007806 Ailuropoda melanoleuca Ame_R007806 N 0.750
CARHSP1 Procavia capensis ENSPCAG00000002081 N 0.735
CARHSP1 Macropus eugenii ENSMEUG00000016403 N 0.735
CARHSP1 Tupaia belangeri ENSTBEG00000005777 N 0.735
CARHSP1 Otolemur garnettii ENSOGAG00000014708 N 0.735
CARHSP1 Dasypus novemcinctus ENSDNOG00000024912 N 0.735
Q2NKU4_BOVIN Bos taurus ENSBTAG00000001441 N 0.735
CARHSP1 Sus scrofa ENSSSCG00000007911 N 0.735
CARHSP1 Microcebus murinus ENSMICG00000006185 N 0.735
CARHSP1 Echinops telfairi ENSETEG00000008180 N 0.721
XM_001367025.1 Monodelphis domestica ENSMODG00000005721 N 0.721
CARHSP1 Pteropus vampyrus ENSPVAG00000003125 N 0.721
CARHSP1 Myotis lucifugus ENSMLUG00000009734 N 0.721
ENSPPYG00000007085 Pongo pygmaeus ENSPPYG00000007085 N 0.706
CARHSP1 Loxodonta africana ENSLAFG00000022498 N 0.706
CARHSP1 Anolis carolinensis ENSACAG00000006749 N 0.706
CARHSP1 Felis catus ENSFCAG00000003289 N 0.706