CSDC2 (Gasterosteus aculeatus)
CSD

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00313 (CSD) IPR002059 ENSGACG00000004665 T16859_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000006164 CSD 80 147
ENSGACP00000006174 CSD 62 129

Links

Other CSD family RBPs
Other Gasterosteus aculeatus RBPs

82 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CSDC2 Oryzias latipes ENSORLG00000002636 N 0.912
CSDC2 Tetraodon nigroviridis ENSTNIG00000012937 N 0.912
CSDC2 Takifugu rubripes ENSTRUG00000017020 N 0.912
csdc2 Danio rerio ENSDARG00000041323 N 0.897
CSDC2 Tetraodon nigroviridis ENSTNIG00000004955 N 0.868
CSDC2 Gallus gallus ENSGALG00000000049 N 0.855
CSDC2 Meleagris gallopavo ENSMGAG00000012131 N 0.855
CSDC2 Oryzias latipes ENSORLG00000014166 N 0.853
ENSPPYG00000011873 Pongo pygmaeus ENSPPYG00000011873 N 0.841
CSDC2 Pteropus vampyrus ENSPVAG00000001165 N 0.841
CSDC2 Procavia capensis ENSPCAG00000014857 N 0.841
Q08E16_BOVIN Bos taurus ENSBTAG00000004004 N 0.841
Ame_R018068 Ailuropoda melanoleuca Ame_R018068 N 0.841
CSDC2 Ochotona princeps ENSOPRG00000010664 N 0.841
Csdc2 Rattus norvegicus ENSRNOG00000005332 N 0.841
CSDC2 Sus scrofa ENSSSCG00000000062 N 0.841
CSDC2 Cavia porcellus ENSCPOG00000025372 N 0.841
CSDC2 Taeniopygia guttata ENSTGUG00000009898 N 0.841
CSDC2 Tupaia belangeri ENSTBEG00000011596 N 0.841
CSDC2 Homo sapiens ENSG00000172346 N 0.841
CSDC2 Loxodonta africana ENSLAFG00000027155 N 0.841
CSDC2 Tursiops truncatus ENSTTRG00000006736 N 0.841
Csdc2 Dipodomys ordii ENSDORG00000011754 N 0.841
CSDC2 Macropus eugenii ENSMEUG00000002050 N 0.841
CSDC2 Echinops telfairi ENSETEG00000019516 N 0.841
CSDC2 Monodelphis domestica ENSMODG00000016565 N 0.841
LOC100070658 Equus caballus ENSECAG00000022234 N 0.841
CSDC2 Macaca mulatta ENSMMUG00000001852 N 0.841
CSDC2 Erinaceus europaeus ENSEEUG00000003639 N 0.841
CSDC2 Microcebus murinus ENSMICG00000005978 N 0.841
CSDC2 Felis catus ENSFCAG00000003677 N 0.841
Csdc2 Mus musculus ENSMUSG00000042109 N 0.841
CSDC2 Takifugu rubripes ENSTRUG00000004175 N 0.838
LOC100400889 Callithrix jacchus ENSCJAG00000002580 N 0.826
CSDC2 Oryctolagus cuniculus ENSOCUG00000006938 N 0.826
CSDC2 Otolemur garnettii ENSOGAG00000002852 N 0.826
CSDC2 Myotis lucifugus ENSMLUG00000002495 N 0.826
CSDC2 Anolis carolinensis ENSACAG00000004668 N 0.826
CSDC2 Gasterosteus aculeatus ENSGACG00000007540 N 0.824
CSDC2 Danio rerio ENSDARG00000068477 N 0.809
CARHSP1 Gallus gallus ENSGALG00000007313 N 0.794
carhsp1 Danio rerio ENSDARG00000053129 N 0.794
ENSMGAG00000008554 Meleagris gallopavo ENSMGAG00000008554 N 0.794
LOC100395892 Callithrix jacchus ENSCJAG00000022227 N 0.779
Ame_R007806 Ailuropoda melanoleuca Ame_R007806 N 0.779
LOC100410498 Callithrix jacchus ENSCJAG00000017286 N 0.779
CARHSP1 Tursiops truncatus ENSTTRG00000014828 N 0.779
CARHSP1 Pan troglodytes ENSPTRG00000007749 N 0.779
CARHSP1 Ornithorhynchus anatinus ENSOANG00000008257 N 0.779
Carhsp1 Mus musculus ENSMUSG00000008393 N 0.779
LOC100051399 Equus caballus ENSECAG00000019386 N 0.779
CARHSP1 Macaca mulatta ENSMMUG00000021565 N 0.779
CARHSP1 Ochotona princeps ENSOPRG00000010356 N 0.779
CARHSP1 Canis familiaris ENSCAFG00000019003 N 0.779
CARHSP1 Taeniopygia guttata ENSTGUG00000004665 N 0.779
CARHSP1 Homo sapiens ENSG00000153048 N 0.779
CARHSP1 Spermophilus tridecemlineatus ENSSTOG00000007008 N 0.779
Carhsp1 Rattus norvegicus ENSRNOG00000002610 N 0.779
CARHSP1 Cavia porcellus ENSCPOG00000025492 N 0.779
CARHSP1 Dasypus novemcinctus ENSDNOG00000024912 N 0.765
CARHSP1 Sus scrofa ENSSSCG00000007911 N 0.765
CARHSP1 Pteropus vampyrus ENSPVAG00000003125 N 0.765
CARHSP1 Otolemur garnettii ENSOGAG00000014708 N 0.765
CARHSP1 Microcebus murinus ENSMICG00000006185 N 0.765
CARHSP1 Macropus eugenii ENSMEUG00000016403 N 0.765
CARHSP1 Tupaia belangeri ENSTBEG00000005777 N 0.765
CARHSP1 Procavia capensis ENSPCAG00000002081 N 0.765
AAH84399 Xenopus laevis AAH84399 N 0.765
Q2NKU4_BOVIN Bos taurus ENSBTAG00000001441 N 0.765
CSDC2 Canis familiaris ENSCAFG00000001051 N 0.757
CARHSP1 Echinops telfairi ENSETEG00000008180 N 0.750
CARHSP1 Felis catus ENSFCAG00000003289 N 0.750
CARHSP1 Gasterosteus aculeatus ENSGACG00000005857 N 0.750
CARHSP1 Myotis lucifugus ENSMLUG00000009734 N 0.750
XM_001367025.1 Monodelphis domestica ENSMODG00000005721 N 0.750
CARHSP1 Tetraodon nigroviridis ENSTNIG00000011153 N 0.735
CARHSP1 Takifugu rubripes ENSTRUG00000010962 N 0.735
CARHSP1 Loxodonta africana ENSLAFG00000022498 N 0.721
XM_001363201.1 Monodelphis domestica ENSMODG00000024949 N 0.721
ENSPPYG00000007085 Pongo pygmaeus ENSPPYG00000007085 N 0.721
CARHSP1 Anolis carolinensis ENSACAG00000006749 N 0.706