LOC100414871 (Callithrix jacchus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSCJAG00000003925 T18528_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FMR1
M305_0.6 		Homo sapiens Sequence logo not available KAGCGRCUGG SELEX
Cook et al.(2011)
471_15805463.1 		0.989
FMR1
M304_0.6 		Homo sapiens Sequence logo not available GGGCKAAGGARK SELEX
Cook et al.(2011)
471_15805463 		0.989
FMR1
M016_0.6 		Homo sapiens KGACARG RNAcompete
Ray et al.(2013)
RNCMPT00016 		0.989
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000007304 KH 220 279
ENSCJAP00000007333 KH 220 279
ENSCJAP00000007333 KH 283 396
ENSCJAP00000007345 KH 220 279
ENSCJAP00000007345 KH 283 337
ENSCJAP00000007346 KH 220 279
ENSCJAP00000007346 KH 283 335

Links

Other KH family RBPs
Other Callithrix jacchus RBPs

52 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R017945 Ailuropoda melanoleuca Ame_R017945 N 0.000
ALKB8_BOVIN Bos taurus ENSBTAG00000010642 N 0.000
ALKBH8 Canis familiaris ENSCAFG00000014696 N 0.000
ALKBH8 Cavia porcellus ENSCPOG00000006875 N 0.000
Alkbh8 Dipodomys ordii ENSDORG00000008596 N 0.000
LOC100061658 Equus caballus ENSECAG00000019425 N 0.000
ALKBH8 Felis catus ENSFCAG00000003526 N 0.000
ALKBH8 Homo sapiens ENSG00000137760 N 0.000
ALKBH8 Gorilla gorilla ENSGGOG00000015505 N 0.000
ALKBH8 Loxodonta africana ENSLAFG00000017895 N 0.000
ENSMEUG00000015254 Macropus eugenii ENSMEUG00000015254 N 0.000
ALKBH8 Microcebus murinus ENSMICG00000001044 N 0.000
ALKBH8 Macaca mulatta ENSMMUG00000005437 N 0.000
LOC100025269 Monodelphis domestica ENSMODG00000014721 N 0.000
Alkbh8 Mus musculus ENSMUSG00000025899 N 0.000
ENSOANG00000010463 Ornithorhynchus anatinus ENSOANG00000010463 N 0.000
ALKBH8 Oryctolagus cuniculus ENSOCUG00000011931 N 0.000
ALKBH8 Otolemur garnettii ENSOGAG00000004956 N 0.000
ALKBH8 Ochotona princeps ENSOPRG00000009592 N 0.000
ALKBH8 Procavia capensis ENSPCAG00000005589 N 0.000
ALKBH8 Pan troglodytes ENSPTRG00000004240 N 0.000
D3ZKL7_RAT Rattus norvegicus ENSRNOG00000024525 N 0.000
ALKBH8 Sorex araneus ENSSARG00000008350 N 0.000
ENSSTOG00000007139 Spermophilus tridecemlineatus ENSSTOG00000007139 N 0.000
ALKBH8 Tupaia belangeri ENSTBEG00000002728 N 0.000
ALKBH8 Tarsius syrichta ENSTSYG00000007339 N 0.000
ALKBH8 Vicugna pacos ENSVPAG00000004932 N 0.000