CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPK
(
Erinaceus europaeus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSEEUG00000014624
T18736_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
hnRNPK
M026_0.6
Homo sapiens
CCAWMCC
RNAcompete
Ray et al.(2013)
RNCMPT00026
0.995
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000013356
KH
44
104
ELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPEHILSISADIETIGEILKKI
ENSEEUP00000013356
KH
146
209
ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKII
ENSEEUP00000013356
KH
389
451
TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLL
Links
Other
KH
family RBPs
Other
Erinaceus europaeus
RBPs
53 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Bm1_01380
Brugia malayi
Bm1_01380
N
0.000
PPIL4
Dasypus novemcinctus
ENSDNOG00000000490
N
0.000
ENSOANG00000021724
Ornithorhynchus anatinus
ENSOANG00000021724
N
0.000
PPIL4
Tupaia belangeri
ENSTBEG00000001467
N
0.000
e_gw1.169.16.1
Postia placenta
e_gw1.169.16.1
N
0.000