CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPK
(
Erinaceus europaeus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSEEUG00000014624
T18736_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
hnRNPK
M026_0.6
Homo sapiens
CCAWMCC
RNAcompete
Ray et al.(2013)
RNCMPT00026
0.995
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000013356
KH
44
104
ELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPEHILSISADIETIGEILKKI
ENSEEUP00000013356
KH
146
209
ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKII
ENSEEUP00000013356
KH
389
451
TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLL
Links
Other
KH
family RBPs
Other
Erinaceus europaeus
RBPs
53 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HNRNPK
Tarsius syrichta
ENSTSYG00000001196
I
0.995
HNRNPK
Otolemur garnettii
ENSOGAG00000007478
I
0.995
HNRPK_RABIT
Oryctolagus cuniculus
ENSOCUG00000010364
I
0.995
HNRNPK
Ornithorhynchus anatinus
ENSOANG00000014612
I
0.995
Hnrnpk
Mus musculus
ENSMUSG00000021546
I
0.995
HNRNPK
Choloepus hoffmanni
ENSCHOG00000010832
I
0.995
ENSPPYG00000019327
Pongo pygmaeus
ENSPPYG00000019327
I
0.995
Ame_R002812
Ailuropoda melanoleuca
Ame_R002812
I
0.995
HNRNPK
Taeniopygia guttata
ENSTGUG00000003138
I
0.995
Hnrnpk
Rattus norvegicus
ENSRNOG00000019113
I
0.995
HNRNPK
Pan troglodytes
ENSPTRG00000021061
I
0.995
HNRNPK
Monodelphis domestica
ENSMODG00000018992
I
0.995
HNRNPK
Callithrix jacchus
ENSCJAG00000003750
I
0.995
HNRNPK
Gorilla gorilla
ENSGGOG00000015500
I
0.995
HNRNPK
Gallus gallus
ENSGALG00000012591
I
0.995
ENSMODG00000008402
Monodelphis domestica
ENSMODG00000008402
I
0.995
HNRNPK
Equus caballus
ENSECAG00000025104
I
0.995
HNRNPK
Macropus eugenii
ENSMEUG00000006975
I
0.995
ENSMMUG00000018871
Macaca mulatta
ENSMMUG00000018871
I
0.995
hnRNPK
Homo sapiens
ENSG00000165119
D
0.995
HNRNPK
Tursiops truncatus
ENSTTRG00000016693
I
0.989
HNRNPK
Echinops telfairi
ENSETEG00000016294
I
0.989
HNRNPK
Anolis carolinensis
ENSACAG00000001479
I
0.989
HNRPK_CHICK
Gallus gallus
ENSGALG00000014366
I
0.989
HNRPK_BOVIN
Bos taurus
ENSBTAG00000021131
I
0.989
HNRNPK
Loxodonta africana
ENSLAFG00000026567
I
0.989
ENSTTRG00000004906
Tursiops truncatus
ENSTTRG00000004906
I
0.984
Gm7964
Mus musculus
ENSMUSG00000063902
I
0.979
XM_533511.2
Canis familiaris
ENSCAFG00000001399
I
0.973
HNRNPK
Tupaia belangeri
ENSTBEG00000001289
I
0.973
AAH44711
Xenopus laevis
AAH44711
I
0.968
AAB26047
Xenopus laevis
AAB26047
I
0.963
XM_855974.1
Canis familiaris
ENSCAFG00000017503
I
0.957
hnrpkl
Danio rerio
ENSDARG00000007034
I
0.957
HNRNPK
Felis catus
ENSFCAG00000014862
I
0.947
hnrnpk
Xenopus tropicalis
ENSXETG00000011722
I
0.941
HNRNPK
Pteropus vampyrus
ENSPVAG00000009078
I
0.941
HNRNPK
Takifugu rubripes
ENSTRUG00000000535
I
0.936
HNRNPK
Gasterosteus aculeatus
ENSGACG00000007581
I
0.931
ENSPPYG00000013626
Pongo pygmaeus
ENSPPYG00000013626
I
0.926
HNRNPK
Oryzias latipes
ENSORLG00000005161
I
0.926
ENSOCUG00000025925
Oryctolagus cuniculus
ENSOCUG00000025925
I
0.915
HNRNPK
Takifugu rubripes
ENSTRUG00000010659
I
0.910
HNRNPK
Tetraodon nigroviridis
ENSTNIG00000006005
I
0.910
hnrnpk
Danio rerio
ENSDARG00000018914
I
0.899
ENSRNOG00000013016
Rattus norvegicus
ENSRNOG00000013016
I
0.872
D3ZJL5_RAT
Rattus norvegicus
ENSRNOG00000029014
I
0.867
HNRNPK
Oryzias latipes
ENSORLG00000004704
I
0.835
HNRNPK
Procavia capensis
ENSPCAG00000016196
I
0.824
HNRNPK
Ochotona princeps
ENSOPRG00000015723
I
0.824
ENSCPOG00000005024
Cavia porcellus
ENSCPOG00000005024
I
0.798
HNRNPK
Tetraodon nigroviridis
ENSTNIG00000007554
I
0.798
HNRNPK
Myotis lucifugus
ENSMLUG00000005871
I
0.702