CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PCBP4
(
Ochotona princeps
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSOPRG00000008763
T19253_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000008022
KH
10
44
PQSSARITISEGSCPERITTITGSTAAVFHAVSMI
ENSOPRP00000008022
KH
68
97
TLRLVIPASQCGSLIGKAGTKIKEIREVRG
ENSOPRP00000008022
KH
131
169
LQTTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI
ENSOPRP00000008022
KH
246
308
SQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLI
Links
Other
KH
family RBPs
Other
Ochotona princeps
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
estExt_Genewise1Plus.C_110210
Phytophthora capsici
estExt_Genewise1Plus.C_110210
N
0.000
PITG_10487
Phytophthora infestans
PITG_10487
N
0.000
s_516083
Phytophthora sojae
s_516083
N
0.000