CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PCBP4
(
Echinops telfairi
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSETEG00000001778
T18743_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000001443
KH
8
45
ALCLQSSARITISEGSCPERITTITGSTAAVFHAVSMI
ENSETEP00000001443
KH
69
97
TLRLVIPASQCGSLIGKAGTKIKEIREVR
ENSETEP00000001443
KH
117
154
QTTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI
ENSETEP00000001443
KH
231
293
SQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALTQYLI
Links
Other
KH
family RBPs
Other
Echinops telfairi
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PCBP4
Procavia capensis
ENSPCAG00000009515
N
0.976
Ame_R007066
Ailuropoda melanoleuca
Ame_R007066
N
0.970
PCBP4
Homo sapiens
ENSG00000090097
I
0.959
PCBP4
Macropus eugenii
ENSMEUG00000006917
N
0.958
PCBP4
Tursiops truncatus
ENSTTRG00000001443
N
0.953
PCBP4
Pteropus vampyrus
ENSPVAG00000012474
N
0.953
PCBP4
Spermophilus tridecemlineatus
ENSSTOG00000002573
N
0.953
PCBP4
Ochotona princeps
ENSOPRG00000008763
N
0.947
PCBP4
Microcebus murinus
ENSMICG00000002686
N
0.947
PCBP4
Monodelphis domestica
ENSMODG00000011790
I
0.940
PCBP4
Ornithorhynchus anatinus
ENSOANG00000014110
I
0.930