CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Glyma18g08100.1
(
Glycine max
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
Glyma18g08100.1
T21218_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Glyma18g08100.1
KH
157
206
LSRAIGRLSGKGGKTKFAIENASKTRIVIADTKIHILGSFANIKIARDSL
Links
Other
KH
family RBPs
Other
Glycine max
RBPs
189 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
estExt_fgenesh2_pg.C_120096
Neurospora discreta
estExt_fgenesh2_pg.C_120096
N
0.000
e_gw1.1.3735.1
Myceliophthora thermophila
e_gw1.1.3735.1
N
0.000
FGSG_06181
Fusarium graminearum
FGSG_06181
N
0.000
FOXG_08528
Fusarium oxysporum
FOXG_08528
N
0.000
FVEG_06144
Fusarium verticillioides
FVEG_06144
N
0.000
NCU05266
Neurospora crassa
NCU05266
N
0.000
Pa_3_4120
Podospora anserina
Pa_3_4120
N
0.000