An08g05260 (Aspergillus niger)
La,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF05383 (La)
PF00076 (RRM_1) 		IPR006630
IPR000504 		CADANGAG00006847 T23326_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00006721 La 108 166
CADANGAP00006721 RRM 213 272

Links

Other La,RRM family RBPs
Other Aspergillus niger RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ARB_01641 Arthroderma benhamiae ARB_01641 N 0.792
BDBG_00954 Blastomyces dermatitidis BDBG_00954 N 0.808
ACLA_022870 Aspergillus clavatus CADACLAG00002218 N 0.858
AFLA_066270 Aspergillus flavus CADAFLAG00008051 N 0.816
AFUA_1G12590 Aspergillus fumigatus CADAFUAG00007294 N 0.867
ANIA_01045 Aspergillus nidulans CADANIAG00001597 N 0.842
AO090001000218 Aspergillus oryzae CADAORAG00000197 N 0.816
ATEG_00450 Aspergillus terreus CADATEAG00009019 N 0.925
NFIA_012960 Neosartorya fischeri CADNFIAG00001025 N 0.867
CIMG_06864 Coccidioides immitis CIMG_06864 N 0.775
CPSG_09523 Coccidioides posadasii CPSG_09523 N 0.775
fgenesh1_pg.00083_#_507 Aspergillus carbonarius fgenesh1_pg.00083_#_507 N 0.941
HCAG_00786 Histoplasma capsulatum HCAG_00786 N 0.766
MCYG_01238 Microsporum canis MCYG_01238 N 0.792
MGYG_01788 Microsporum gypseum MGYG_01788 N 0.766
PABG_00372 Paracoccidioides brasiliensis PABG_00372 N 0.800
Pc13g13010 Penicillium chrysogenum Pc13g13010 N 0.848
PMAA_068330 Penicillium marneffei PMAA_068330 N 0.750
TEQG_02174 Trichophyton equinum TEQG_02174 N 0.800
TERG_07656 Trichophyton rubrum TERG_07656 N 0.782
TESG_01444 Trichophyton tonsurans TESG_01444 N 0.800
TRV_05156 Trichophyton verrucosum TRV_05156 N 0.767
UREG_03619 Uncinocarpus reesii UREG_03619 N 0.769