CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AO090005000845
(
Aspergillus oryzae
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
CADAORAG00002798
T24094_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADAORAP00002755
PUF
236
269
YRGELYGLCKDQHGCRYLQRKLEERNPDHVQMIF
CADAORAP00002755
PUF
271
305
ETHLHVVELMTDPFGNYLCQKLLEYSNDEQRTALI
CADAORAP00002755
PUF
311
342
QLVKIALNQHGTRALQKMIEFISTPEQTQTVI
CADAORAP00002755
PUF
344
378
ALEDHVVELVQDLNGNHVIQKCLNRLSAEDAQFIY
CADAORAP00002755
PUF
381
414
VGANCVVVGTHRHGCCVLQRCIDHASGEQRARLI
CADAORAP00002755
PUF
416
450
QITSNAFALVQDPFGNYVVQYILDLAEPHFTEPLC
CADAORAP00002755
PUF
452
486
TFRGNIPALSKQKFSSNVIEKCLRTADGPVRGQLI
CADAORAP00002755
PUF
492
525
GSELEKMLRDSFANYVVQTAMDFADSETRTRLID
Links
Other
PUF
family RBPs
Other
Aspergillus oryzae
RBPs
24 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ARB_07066
Arthroderma benhamiae
ARB_07066
N
0.780
BDBG_05830
Blastomyces dermatitidis
BDBG_05830
N
0.874
ACLA_031910
Aspergillus clavatus
CADACLAG00001932
N
0.916
AFLA_080970
Aspergillus flavus
CADAFLAG00000878
N
1.000
AFUA_1G02510
Aspergillus fumigatus
CADAFUAG00009000
N
0.906
An01g05700
Aspergillus niger
CADANGAG00000562
N
0.923
ANIA_10071
Aspergillus nidulans
CADANIAG00002391
N
0.835
ATEG_04843
Aspergillus terreus
CADATEAG00009935
N
0.935
NFIA_022100
Neosartorya fischeri
CADNFIAG00001651
N
0.912
CIMG_11716
Coccidioides immitis
CIMG_11716
N
0.830
CPSG_00792
Coccidioides posadasii
CPSG_00792
N
0.830
fgenesh1_pm.00009_#_276
Aspergillus carbonarius
fgenesh1_pm.00009_#_276
N
0.945
HCAG_06968
Histoplasma capsulatum
HCAG_06968
N
0.859
MCYG_06825
Microsporum canis
MCYG_06825
N
0.777
MGYG_03789
Microsporum gypseum
MGYG_03789
N
0.747
PABG_07309
Paracoccidioides brasiliensis
PABG_07309
N
0.819
Pc22g21770
Penicillium chrysogenum
Pc22g21770
N
0.838
PMAA_095200
Penicillium marneffei
PMAA_095200
N
0.834
TEQG_02915
Trichophyton equinum
TEQG_02915
N
0.780
TESG_00225
Trichophyton tonsurans
TESG_00225
N
0.780
TRV_05699
Trichophyton verrucosum
TRV_05699
N
0.780