CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MGYG_03789
(
Microsporum gypseum
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
MGYG_03789
T23857_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MGYG_03789T0
PUF
586
619
YSGEIYGMCKDQHGCRYLQRKLEEGVPEHVQIIF
MGYG_03789T0
PUF
621
655
ETQMHVVELMTDPFGNYLCQKLLEFTNDEQRTGLI
MGYG_03789T0
PUF
658
692
AAPHLVQIALNQHGTRALQKMIEFISTPEQIQTVI
MGYG_03789T0
PUF
694
728
ALSGQVVELVQDLNGNHVIQKCLNRLSAPDAQFIY
MGYG_03789T0
PUF
732
764
GKECVAVGTHRHGCCVLQRCIDHASGDQRAKLI
MGYG_03789T0
PUF
766
798
QITKSSYSLVQDPFGNYVIQYICRLTSSTWILE
MGYG_03789T0
PUF
814
843
SPALSKQKFSSNVIEKCIRTSDFNMRRAFI
MGYG_03789T0
PUF
851
881
ELPNMLRDSFANYVIQTAMDFADPESRNTLI
Links
Other
PUF
family RBPs
Other
Microsporum gypseum
RBPs
22 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TERG_04136
Trichophyton rubrum
TERG_04136
N
0.951
ARB_07066
Arthroderma benhamiae
ARB_07066
N
0.951
TRV_05699
Trichophyton verrucosum
TRV_05699
N
0.951
TESG_00225
Trichophyton tonsurans
TESG_00225
N
0.948
TEQG_02915
Trichophyton equinum
TEQG_02915
N
0.948
MCYG_06825
Microsporum canis
MCYG_06825
N
0.944
PABG_07309
Paracoccidioides brasiliensis
PABG_07309
N
0.776
BDBG_05830
Blastomyces dermatitidis
BDBG_05830
N
0.767
HCAG_06968
Histoplasma capsulatum
HCAG_06968
N
0.764
AFUA_1G02510
Aspergillus fumigatus
CADAFUAG00009000
N
0.761
CPSG_00792
Coccidioides posadasii
CPSG_00792
N
0.761
CIMG_11716
Coccidioides immitis
CIMG_11716
N
0.761
NFIA_022100
Neosartorya fischeri
CADNFIAG00001651
N
0.754
AO090005000845
Aspergillus oryzae
CADAORAG00002798
N
0.747
AFLA_080970
Aspergillus flavus
CADAFLAG00000878
N
0.747
An01g05700
Aspergillus niger
CADANGAG00000562
N
0.746
ACLA_031910
Aspergillus clavatus
CADACLAG00001932
N
0.745
fgenesh1_pm.00009_#_276
Aspergillus carbonarius
fgenesh1_pm.00009_#_276
N
0.743
ATEG_04843
Aspergillus terreus
CADATEAG00009935
N
0.733
PMAA_095200
Penicillium marneffei
PMAA_095200
N
0.727
Pc22g21770
Penicillium chrysogenum
Pc22g21770
N
0.712
ANIA_10071
Aspergillus nidulans
CADANIAG00002391
N
0.704