CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ACLA_031910
(
Aspergillus clavatus
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
CADACLAG00001932
T24073_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADACLAP00001885
PUF
586
619
YRGELYSLCKDQHGCRYLQRKLEERDPEHVQLIF
CADACLAP00001885
PUF
621
655
ETHLHVVELMTDPFGNYLCQKLLEYSNDDQRTALI
CADACLAP00001885
PUF
661
692
QLVKIALNQHGTRALQKMIEFISTAEQTQTVI
CADACLAP00001885
PUF
694
728
ALRDHVVELVQDLNGNHVIQKCLNRLSAEDAQFIY
CADACLAP00001885
PUF
731
764
VGGNCVVVGTHRHGCCVLQRCIDHASGEQRARLI
CADACLAP00001885
PUF
766
800
QITSNAFALVQDPFGNYVVQYILDLAEPHFTEPLC
CADACLAP00001885
PUF
802
836
SFRGNIPALSKQKFSSNVIEKCLRTADFQIKRQMI
CADACLAP00001885
PUF
843
874
VELEKMLRDSFANYVVQTAMDFADPETRGRIV
Links
Other
PUF
family RBPs
Other
Aspergillus clavatus
RBPs
22 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
fgenesh1_pm.00009_#_276
Aspergillus carbonarius
fgenesh1_pm.00009_#_276
N
0.949
NFIA_022100
Neosartorya fischeri
CADNFIAG00001651
N
0.931
An01g05700
Aspergillus niger
CADANGAG00000562
N
0.927
ATEG_04843
Aspergillus terreus
CADATEAG00009935
N
0.927
AFUA_1G02510
Aspergillus fumigatus
CADAFUAG00009000
N
0.920
AFLA_080970
Aspergillus flavus
CADAFLAG00000878
N
0.916
AO090005000845
Aspergillus oryzae
CADAORAG00002798
N
0.916
Pc22g21770
Penicillium chrysogenum
Pc22g21770
N
0.859
BDBG_05830
Blastomyces dermatitidis
BDBG_05830
N
0.851
HCAG_06968
Histoplasma capsulatum
HCAG_06968
N
0.844
CPSG_00792
Coccidioides posadasii
CPSG_00792
N
0.827
CIMG_11716
Coccidioides immitis
CIMG_11716
N
0.827
ANIA_10071
Aspergillus nidulans
CADANIAG00002391
N
0.827
PMAA_095200
Penicillium marneffei
PMAA_095200
N
0.825
PABG_07309
Paracoccidioides brasiliensis
PABG_07309
N
0.812
TESG_00225
Trichophyton tonsurans
TESG_00225
N
0.775
TRV_05699
Trichophyton verrucosum
TRV_05699
N
0.775
TERG_04136
Trichophyton rubrum
TERG_04136
N
0.775
ARB_07066
Arthroderma benhamiae
ARB_07066
N
0.775
TEQG_02915
Trichophyton equinum
TEQG_02915
N
0.775
MCYG_06825
Microsporum canis
MCYG_06825
N
0.772
MGYG_03789
Microsporum gypseum
MGYG_03789
N
0.745