CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LmjF33.1150
(
Leishmania major
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
LmjF33.1150
T24585_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
LmjF33.1150
PUF
407
438
DLKGYAVEFAKDQEGSRFIQSAVDTASPESLD
LmjF33.1150
PUF
443
475
EIFESPLELVTDIFGNYVLQKLLDKGNTPQLTF
LmjF33.1150
PUF
480
505
MCGHVVELTMQTYGCRVIQKCIEVMP
LmjF33.1150
PUF
515
548
ELKDNVAKCIQDQNGNHVIQKCVEVIPQRCGFII
LmjF33.1150
PUF
550
583
AFSGRVMELATHAYGCRVIQCIMQHCPEQEDTIF
LmjF33.1150
PUF
585
620
ELLKAVDVLAKDQYGNYVIQHVLQNVKDESKIESVY
LmjF33.1150
PUF
622
656
ALKPKFFYLSKQKFASNVMEKLYARSSPANRMEIV
LmjF33.1150
PUF
736
761
LCLMMSDQYANYVVQRVLDASEVDQF
Links
Other
PUF
family RBPs
Other
Leishmania major
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LbrM33_V2.1360
Leishmania braziliensis
LbrM33_V2.1360
N
0.950
LinJ33_V3.1210
Leishmania infantum
LinJ33_V3.1210
N
0.996
LmxM32.1150
Leishmania mexicana
LmxM32.1150
N
0.984