CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LbrM33_V2.1360
(
Leishmania braziliensis
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
LbrM33_V2.1360
T24565_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
LbrM33_V2.1360
PUF
401
435
DLNGYAVEFAKDQEGSRFIQSAVDSASPESLDILF
LbrM33_V2.1360
PUF
441
469
APLELVTDIFGNYVLQKLLDKGNTPQLTF
LbrM33_V2.1360
PUF
474
501
MCGHVVELTMQTYGCRVIQKCIEVMPPA
LbrM33_V2.1360
PUF
509
542
ELKDNVAKCIQDQNGNHVIQKCVEVIPQQCGFII
LbrM33_V2.1360
PUF
544
577
AFSGRVMELATHAYGCRVIQCIMQHCPEQEDTIF
LbrM33_V2.1360
PUF
579
613
ELLKAVDVLAKDQYGNYVIQHVLQNVKDENKIESV
LbrM33_V2.1360
PUF
616
650
ALKPKFFYLSKQKFASNVMEKLYARSSPENRMAIV
LbrM33_V2.1360
PUF
730
755
LCLMMSDQYANYVVQRVLDASEVDQF
Links
Other
PUF
family RBPs
Other
Leishmania braziliensis
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LinJ33_V3.1210
Leishmania infantum
LinJ33_V3.1210
N
0.950
LmjF33.1150
Leishmania major
LmjF33.1150
N
0.950
LmxM32.1150
Leishmania mexicana
LmxM32.1150
N
0.946