Cucsa.069370 (Cucumis sativus)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 Cucsa.069370 T24709_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.069370.1 PUF 137 171
Cucsa.069370.1 PUF 173 203
Cucsa.069370.1 PUF 209 243
Cucsa.069370.2 PUF 137 171
Cucsa.069370.2 PUF 173 203
Cucsa.069370.3 PUF 137 171
Cucsa.069370.3 PUF 173 203
Cucsa.069370.3 PUF 209 243

Links

Other PUF family RBPs
Other Cucumis sativus RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AFLA_107810 Aspergillus flavus CADAFLAG00004517 N 0.000
AO090023000366 Aspergillus oryzae CADAORAG00007500 N 0.000
CC1G_07391 Coprinopsis cinerea CC1G_07391 N 0.000
CNBG_2318 Cryptococcus neoformans CNBG_2318 N 0.000
EDP43481.1 Malassezia globosa EDP43481.1 N 0.000
estExt_fgenesh1_pm.C_50301 Pleurotus ostreatus estExt_fgenesh1_pm.C_50301 N 0.000
estExt_fgenesh2_kg.C_50272 Agaricus bisporus estExt_fgenesh2_kg.C_50272 N 0.000
estExt_fgeneshPB_pm.C_20123 Phycomyces blakesleeanus estExt_fgeneshPB_pm.C_20123 N 0.000
estExt_Genewise1Plus.C_1610001 Postia placenta estExt_Genewise1Plus.C_1610001 N 0.000
eu2.Lbscf0010g02950 Laccaria bicolor eu2.Lbscf0010g02950 N 0.000
e_gw1.2.975.1 Mucor circinelloides e_gw1.2.975.1 N 0.000
fgenesh1_pm.C_scaffold_15000005 Phanerochaete chrysosporium fgenesh1_pm.C_scaffold_15000005 N 0.000
fgenesh1_pm.C_scaffold_9000021 Pleurotus ostreatus fgenesh1_pm.C_scaffold_9000021 N 0.000
fgenesh2_pm.C_scaffold_3000490 Heterobasidion annosum fgenesh2_pm.C_scaffold_3000490 N 0.000
fgeneshTM_kg.2_#_205_#_9_2_CCOI_CCON Tremella mesenterica fgeneshTM_kg.2_#_205_#_9_2_CCOI_CCON N 0.000
FGSG_11064 Fusarium graminearum FGSG_11064 N 0.000
FGSG_12376 Fusarium graminearum FGSG_12376 N 0.000
Pc20g10130 Penicillium chrysogenum Pc20g10130 N 0.000
UM02412 Ustilago maydis UM02412 N 0.000